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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs61802517 chr1:144560753 T/C NBPF14 chr1:148003642-148025863:- 0.56 14.87 2.15E-41 Box Plot
THCA rs61828144 chr1:174905377 G/T SERPINC1 chr1:173872942-173886516:- 0.71 8.76 3.32E-17 Box Plot
THCA rs61828148 chr1:174925035 A/G SERPINC1 chr1:173872942-173886516:- 0.74 8.98 6.41E-18 Box Plot
THCA rs61828149 chr1:174926004 C/T SERPINC1 chr1:173872942-173886516:- 0.74 8.83 1.94E-17 Box Plot
THCA rs61828151 chr1:174939176 C/T SERPINC1 chr1:173872942-173886516:- 0.73 8.86 1.6E-17 Box Plot
THCA rs61828152 chr1:174946057 G/A SERPINC1 chr1:173872942-173886516:- 0.74 8.92 1.01E-17 Box Plot
THCA rs61828156 chr1:174976889 C/T SERPINC1 chr1:173872942-173886516:- 0.73 8.78 2.89E-17 Box Plot
THCA rs61828157 chr1:174978038 G/A SERPINC1 chr1:173872942-173886516:- 0.72 8.72 4.76E-17 Box Plot
THCA rs61844265 chr10:54479893 G/A HIST2H4A chr1:149804223-149811339:+ -0.53 -5.92 6.09E-9 Box Plot
THCA rs61846081 chr10:54471387 C/T HIST2H4A chr1:149804223-149811339:+ -0.51 -5.94 5.48E-9 Box Plot
THCA rs61854093 chr10:45934881 C/A AGAP8 chr10:51224681-51371321:- 0.38 5.9 6.89E-9 Box Plot
THCA rs61854113 chr10:46004815 C/T AGAP8 chr10:51224681-51371321:- 0.47 6.9 1.63E-11 Box Plot
THCA rs61854124 chr10:46077158 T/C AGAP8 chr10:51224681-51371321:- 0.47 7.05 6.48E-12 Box Plot
THCA rs61858905 chr10:88905856 T/A FAM35B chr10:46897641-46939143:+ -0.37 -7.22 2.05E-12 Box Plot
THCA rs61858928 chr10:88917974 A/G FAM35B chr10:46897641-46939143:+ 0.37 7.23 1.87E-12 Box Plot